7ye2_F : 3D-footprint complex

Interface of input file ?

structure name	THE CRYO-EM STRUCTURE OF C. CRESCENTUS GCRA-TACDOWN
experiment	NMR
structural superfamily	Sigma2 domain of RNA polymerase sigma factors;Sigma3 and sigma4 domains of RNA polymerase sigma factors;
sequence family	Sigma70 region 3; Sigma70 region 2; Sigma70, region 4; Sigma70 factor, region 12;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ye2_F interface=7,8,11,20,25,268,271,273,277,281,282,286,304,315,318,319,321,322,326,333,339,340,346,349,350,353,388,394,396, drtddpVRmyLremgsvelLsregEiaiakrieagrdtmirglcesaltfeaimvwreelgtgrillrevidlegtyaaivsamegelregvmaildaiasefeafrklqdklvgsrlkgedlsdadrkayeglsatiiqhlktlklnnnriealveqlyainkrliglegrllrladsygisrgeflkayfgselnptwseqvkamgvrwtkfvendsqsvtdirseiaalatetgvpiddyrrivqtvqkgerearqakkemveaNlrLvIsiaKkytNRglqFldliqegniglmkavdkFeyrrgykfstYatWWiRQaitRsiadqaRtiripVHmietiNkiVRtsRqmlheigreptpeelaeklamplekvrkvlkiakEpisleTpIgdeedshlgdfiedknailpidaaiqsnlretttrvlasltpreervlrmrfgigmntdhtleevgqqfsvtrerirqieakalrklkhpsrsrklrsfld
interface signature	VRLLENLIKNRFFYWWRQRRVHNVRRETI

Estimated binding specificities ?

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# IC=13.949 IC/col=0.996 n_of_columns=14

specificity:

A |   0   0  76  96   0   0   0   0  96  96   6  76  24  12
C |  96   0   6   0   0   0   0   0   0   0  66   6  24  12
G |   0  96   8   0  96  96   0   0   0   0  12   6  24  57
T |   0   0   6   0   0   0  96  96   0   0  12   8  24  15

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updated Fri Jan 9 19:48:29 2026