7zb5_DE : 3D-footprint complex

structure name	MOT1(1-1836):TBP:DNA - POST-HYDROLYSIS COMPLEX DIMER
experiment	NMR
structural superfamily	TATA-box binding protein-like;ARM repeat;P-loop containing nucleoside triphosphate hydrolases;
reference complex	7z7n_D 7z7n_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7zb5_D interface=9,11,39,54,56,62,64,99,101,130,131,145,147,153,155, sgitptlqNiVatvnldcrldlktialharnaeynpkrFaavimrirepkttaLiFasgkmVvTgakseddsklasrkyariiqklgfnakftdfkiqNiVgscdikfpirleglaskhhnfssyepelFPgliyrmikpkivlLiFvsgkiVlTgakvreeiyqafemiypvlqdfr > 7zb5_E interface=1273,1274,1278, atrldrlvtiletgstrlirdtavnqladwqkqhpeelfnllsrvvpylrhkdwetrttaakaigkiienaplydpnagrpllrewpferlceflkvdlfdpqwetrhgaamglrevirvhgagagrrrgktrkenndlnrqwlddlayrllcvlmldkftdyssdtsvapiretvgqtlgavlrhisvesvhaiyrllycmvgmvglryvvavrkdlllqdgdmidgvvrcvmqglgdidddvrsvsaatlipmakefvmmrrsaldslinivweslsnlgddlsastgkimdllatlcsfpevleamkvsasqdeersftllvprlypflrhtitsvrlavlkalmtfanlggetsqgwlngrilrlifqniiverdqdtlnmslelwttlvrrlaardpailadefeahaepmmqlalhpigvprhpipmnpalfqkpsggtyvdghmiqgevdlvgvdvlirsrisaakamglimsfiptprlasydtavlqalsspyastqlaaamvideyakncstpevasrfieplqkiidlerpshyrdlvtyvqrvrsasqqlinlfrdhgkvsqgklptlavvvqgepeagpgafsianaekvvnedferlkrlmapgqrlialpqlneareqtvevieeakaakeardarikaaaacalvamkvlpkkpsplikaimdsikteenqelqsrsaatiarlvqlftesgrrgpaekvvanlvkfscvevaetpefpihahktnvilsmqyareakaaritrrgakealeilsknfgaellervptlrtfmeeplvrafsgdlppeardpenafgqeivdamsvirtmtptlhpalhpfvmqqvplvikalrsdlsvfrymaakcmaticsvitvdgmtalvekvlpsinnpldlsfrqgaieviyhliavmgdailpyviflivpvlgrmsdsdnqirliattsfatlvklvpleagipdppglseellkgrdrertfiaqlldpkkiepfkipvaikaelrsyqqegvnwlaflnkyhlhgilcddmglgktlqticivasdhhqraeefartgapevrklpsliicpptlsghwqqeiktyapfltvtayvgspaerramkdsldktdivitsydvcrndidviekynwnycvldeghliknpkakitlavkrltsnhrliltgtpiqnnvlelwslfdflmpgflgaekvfldrfakpiansryskasskeqeagalaiealhkqvlpfllrrlkeevlndlppkilqnyycdlsdlqrklfedftkrqhIFqalQymrklcnklgalrdllvdcgigphralifcqmkemldmvqntsvsylrldgsveankrqdivnkfnsdpsydvlllttsvgglglnltgadtvifvehdwnpqkdlqamdrahrigqkkvvnvyriitrgtleekilslqrfkidvastvvnqqnaglatmdtdqildl
interface signature	NVFLFVTNVFPLFVT/IFQ

Estimated binding specificities ?

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# IC=10.245 IC/col=0.488 n_of_columns=21

specificity:

A |   0   9  24  24  24  24  24  24  24  24  24  24  24   7  96  73  96  96   0   0   9
C |   0  73  24  24  24  24  24  24  24  24  24  24  24   7   0   7   0   0   0   0   7
G |  96   7  24  24  24  24  24  24  24  24  24  24  24   9   0   9   0   0  96  96  73
T |   0   7  24  24  24  24  24  24  24  24  24  24  24  73   0   7   0   0   0   0   7

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updated Sun Dec 15 21:01:40 2024