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3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Sun Dec 15 21:25:55 2024

structure name	CRYSTAL STRUCTURE OF THE PYROCOCCUS ABYSSI RPA TRIMERIZATION CORE BOUND TO POLY-DT20 SSDNA
reference	Legrand et al. 'Nat 14 2326 2023
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	Nucleic acid-binding proteins;
reference complex	8aas_A 8aas_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8aas_A interface=26,30,37,62,64,79,81,139,140,141,142,147, trkkikdieagdrfvevrgtiakvyRvltYdacpecKkkvdydeglgvwicpehgevqpikMtIldfglddgtgyirvTlFgddaeellgvspeeiaekikeleesglttkeaarklaedefyniigreivvrgnvieDRFLglilRasswedvdyrreierikeeleklgvm > 8aas_B interface=25,74,76,77,101,106,108, krmpatrlyikdilegyfvksegdFepnylitkyarkvyrakivgtvvrepliaedetygkfqvddgtgviwvLgFRddtkfaklvrkgdlvqvigkiaeWrddkQiLvegvskvhpnmwilhryetlkekiehikkakialeiynqygitakskviaknkgieeellevidelygim