8cli_AC : 3D-footprint complex

structure name	TFIIIC TAUB-DNA MONOMER
experiment	NMR
structural superfamily	WD40 repeat-like;
reference complex	8cli_A 8cli_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8cli_A interface=206,210,211,295,367,370,374,391,392,481,483,487, mdaleslldevalegldglclpalwsrletrvppfplplepctqeflwralathpgisfyeeprerpdlqlqdryeeidletgilesrrdpvaledvypihmilenkdgiqgscryfkerknitndirtkslqprctmveafdrwgkkliivasqamryraligqegdpdlklpdfsycilerlgrsrwqgelqrdlhttafkvdAgklHYhrkilnknglitmqshvirlptgaqqhsillllnrfhvdrrskydilmeklsvmlstrtnhietlgklreelglcertfkrlyQymlnaglakvvslrlqeihvmvrclkllktvppvdivferdmltqtydlierrgtkgisqaeirvamnvgkLeaRmlcRllqrfkvvkgfmedegRQrttkyiscvfaeesdlsrqyqrekarsellttvslaavieevretyrllkrrnliieavtnlrlieslftiqkmimdqekqegvstkcCkKsivRlvrnlseegllrlyrttviqdgikkkvdlvvhpsmdqndplvrsaieqvrfrisn > 8cli_C interface=454, hcrgmapnglpnhimapvwkclhltkdfreqkhsywefaewiplawkwhllseleaapylpqeeksplfsvqreglpedgtlyrinrfssitahperwdvsfftggplwaldwcpvpegagasqyvalfsspdmnethplsqlhsgpgllqlwglgtlqqescpgnrahfvygiacdngciwdlkfcpsgawelpgtprkapllprlgllalacsdgkvllfslphpeallaqqppdavkpaiykvqcvatlqvgsmqatdpsecgqclslawmptrphqhlaagyyngmvvfwnlptnsplqrirlsdgslklypfqcflahdqavrtlqwckanshflvsagsdrkikfwdlrrpyepinsikrflstelawllpyngvtvaqdncyasyglcgihyidagylgfkayftaprkgtvwslsgsdwlgtiaagdisgeliaailpdmalnpiNvkrpverrfpiykadlipyrtytetvnhhyllfqdtdlgsfhdllrrepmlrmqegeghsqlcldrlqleaihkvrfspnldsygwlvsggqsglvrihfvrglasplghrmqlesrahfnamfq
interface signature	AHYQLRRRQCKR/N

Estimated binding specificities ?

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# IC=11.167 IC/col=1.015 n_of_columns=11

specificity:

A |   4   0  72   4   7   0   0  96  96   4   7
C |   4   0   6  81   4  96   0   0   0  81  81
G |  88  96   9   7   9   0  96   0   0   4   4
T |   0   0   9   4  76   0   0   0   0   7   4

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updated Wed Sep 11 21:33:05 2024