Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE NUCLEOSOME CORE PARTICLE FROM TRYPANOSOMA BRUCEI
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes8com_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  --------RA--                              +--6t7a_C    
                              +-------------3 
  --------RA--            +---5             +--7xsx_a    
                          !   ! 
  --------RG--         +--8   +----------------7e9c_G    
                       !  ! 
  --------RT--       +-9  +--------------------7lyb_G    
                     ! ! 
  --------RG--       ! !                      +7k6p_A    
                     ! +----------------------1 
  --LT----RC--       !                        +5xm1_A    
                     !  
  RAAA--NA----     -10               +--------1jfi_B    
                     !       +-------4 
  ----IT------       !       !       +--------6r8y_H    
                     !   +---6 
  --LT------RG       !   !   !               +8eue_E    
                     +---7   +---------------2 
  --------RT--           !                   +7wlr_E    
                         ! 
  --------RG--           +--------------------5t5k_E

home
updated Wed Dec 20 02:00:19 2023