Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE NUCLEOSOME CORE PARTICLE FROM TRYPANOSOMA BRUCEI
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes8com_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----------RG--                           +--------------8upf_G    
                                   +-------7 
  ----------RG--                   !       !              +7e9c_G    
                                   !       +--------------1 
  ------HGRTRG--                   !                      +8rbx_V    
                                   !  
  ----------RARA                   !                      +6a5l_g    
                                +-10          +-----------2 
  ----------RG--                !  !   +------6           +8txv_G    
                                !  !   !      ! 
  ----------RT--                !  ! +-8      +-----------6px1_A    
                                !  ! ! ! 
  ----------RA--                !  ! ! !                  +7xsx_a    
                                !  +-9 +------------------3 
  ----------RC--          +----11    !                    +7ux9_E    
                          !     !    ! 
  ----------RGRG          !     !    !             +------8kcb_A    
                          !     !    +-------------5 
  ----------RA--          !     !                  +------7e9c_F    
                       +-12     !  
  ----------RT--       !  !     !                      +8u14_G    
                       !  !     +----------------------4 
  ----------RC--     -13  !                            +7yqk_C    
                       !  !  
  RG------------       !  +-----------------------------7ccr_H    
                       !  
  --RAAANA------       +-----------------------------1jfi_B    
                     

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updated Sat Jan 10 22:53:16 2026