8com_H : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF THE NUCLEOSOME CORE PARTICLE FROM TRYPANOSOMA BRUCEI
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	8com_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8com_H interface=3, rqRkrtwnvyvsrslrsinsqmsmtsrtmkivnsfvndlferiaaeaativrvnrkrtlgarelqtavrlvlpadlakhamaegtkavshass

  
  RT--------       +-----------------------------9fgq_D    
                   ! 
  --RAAANA--     --5                +------------1jfi_B    
                   !          +-----2 
  --------RA       !          !     +------------7xsx_a    
                   +----------4 
  --------RG                  !                  +7e9c_G    
                              !   +--------------1 
  --------RT                  +---3              +8u14_G    
                                  ! 
  --------RG                      +--------------8txv_G

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updated Sat Sep 14 09:33:24 2024