8d2p_A : 3D-footprint complex

structure name	STRUCTURE OF ACIDOTHERMUS CELLULOLYTICUS CAS9 TERNARY COMPLEX (TARGET BOUND)
experiment	NMR
sequence family	HNH endonuclease;
reference complex	8d2n_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8d2p_A interface=135,138,139,207,281,335,337,457,518,578,665, gtvpvtwrlgvdvgersiglaavsyeedkpkeilaavswihdggvgdersgasrlalrgmarrarrlrrfrrarlrdldmllselgwtplpdknvspvdawlarkrlaeeyvvdeterrrllgyavshmarhrgWrnPWttikdlknlpqpsdswertreslearysvslepgtvgqwagyllqrapgirlnptqqslsnatafetRlrqedvlwelrciadvqglpedvvsnvidavfcqkrpsvpaerigrdpldpsqlrasraclefqeyrivaavaNlrirdgsgsrplsleernavieallaqtersltwsdialeilklpnesdltsvPeEdgpsslaysqfapfdetsariaefiaknrrkiptfaqwwqeqdrtsrsdlvaaladnsiagllvhlpdaelealeglalpsgrvaysrltlsgltrvmrddgvdvhnarktcfgvddnwRpplpalheatghpvvdrnlailrkflssatmrwgppqsivvelargasesrerqaeeeaaRrahrkandriraelrasglsdpspadlvrarllelydchcmycgapiswenseldhivpRtdggsnrhenlaitcgacnkekgrrpfaswaetsnrvqlrdvidrvqklkysgnmywtrdefsrykksvvarlkrrtsdpeviqsiEstgyaavalrdrllsygekngvaqvavfrggvtaearrwldisierlfsrvaifaqststkrldrrhhavdavvlttltpgvaktladarsrrvsasteepqspayrqwkescsglgdllistaardsiavaaplrlrptgalheetlrafsehtvgaawkgaelrrivepevyaaflaltdpggrflkvspsedvlpadenrhivlsdrvlgprdrvklfpddrgsirvrggaayiasfhharvfrwgsshspsfallrvsladlavagllrdgvdvftaelppwtpawryasialvkavesgdakqvgwlvpgdeldfgpegvttaagdlsmflkyfperhwvvtgfeddkrinlkpaflsaeqaevlrtersdrpdtlteageilaqffprcwratvakvlchpgltvirrtalgqprwrrghlpyswrpwsadpws
interface signature	WPWRNPERRRE

Estimated binding specificities ?

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# IC=11.866 IC/col=0.698 n_of_columns=17

specificity:

A |   0   0  96   0  24  24  24  12   0  24   0   0  10  58  12  24   0
C |  96  96   0   0  24  24  24  62   0  24   0  96  58  12  12  24  96
G |   0   0   0  96  24  24  24  12   0  24  96   0  16  12  12  24   0
T |   0   0   0   0  24  24  24  10  96  24   0   0  12  14  60  24   0

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updated Fri Jan 9 21:14:27 2026