8d4a_A : 3D-footprint complex

structure name	CAS12A2 QUATERNARY COMPLEX
experiment	NMR
sequence family	Putative transposase DNAbinding domai;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8d4a_A interface=459,1040,1042,1043,1044,1048,1055,1060,1067,1071,1138,1139, mlhaftnqyqlsktlrfgatlkedekkcksheelkgfvdisyenmkssatenelvkkcercyseivkfhnawekiyyrtdqiavykdfyrqlsrkarfdagkqnsqlitlaslcgmyqgaklsryitnywkdnitrqksflkdfsqqlhqytraleksdkahtkpnlinfnktfmvlanlvneiviplsngaisfpniskledgeeshliefalndysqlseligelkdaiatnggytpfakvtlnhytaeqkphvfkndidakirelkliglvetlkgksseqieeyfsnldkfstyndrnqsvivrtqcfkykpipflvkhqlakyisepngwdedavakvldavgairspahdyannqegfdlnhypikvafdyaweqlanslyttvtfpqemcekylnsiygcevskepvfkfyadllyirknlavlehknnlpsnqeefickinntfenivlpYkisqfetykkdilawindghdhkkytdakqqlgfirgglkgrinpytkltnefkqisstygktfaelrdkfkekneitkithfgiiiedknrdryllaselkheqinhvstilnkldkssefityqvksltsktlikliknhttkkgaispyadfhtsktgfnkneieknwdnykreqvlveyvkdcltdstmaknqnwaefgwnfekcnsyedieheidqksyllqsdtiskqsiaslveggclllpiinqditskerkdknqfskdwnhifegskefrlhpefavsyrtpiegypvqkrygrlqfvcafnahivpqngefinlkkqienfndedvqkrnvtefnkkvnhalsdkeyvvigidrglkqlatlcvldkrgkilgdfeiykkefvraekrseshwehtqaetrhildlsnlrvettiegkkvlvdqsltlvkknrdtpdeeateenkqkiklkqlsyirklqhkmqtneqdvldlinnepsdeefkkrieglissfgegqkyadlpintmremisdlqgviargnnqteknkiieldaadnlkqgivanmigivnyifakysykayisledLsRAYggaKsgydgrYlpstSqdedvdFkeqQnqmlaglgtyqffemqllkklqkiqsdntvlrfvpafrsadnyrnilrleetkykskpfgvvhfidPKftskkcpvcsktnvyrdkddilvckecgfrsdsqlkerennihyihngddngayhialksvenliqmk
interface signature	YLRAYKYSFQPK

Estimated binding specificities ?

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# IC=4.475 IC/col=0.895 n_of_columns=5

specificity:

A |  13  13   0   0   0
C |  13  13   0   0   0
G |  13  16   0   0   0
T |  57  54  96  96  96

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updated Wed Dec 18 16:50:23 2024