8d4a_A : 3D-footprint complex

structure name	CAS12A2 QUATERNARY COMPLEX
experiment	NMR
sequence family	Putative transposase DNAbinding domai;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8d4a_A interface=459,1040,1042,1043,1044,1048,1055,1060,1067,1071,1138,1139, mlhaftnqyqlsktlrfgatlkedekkcksheelkgfvdisyenmkssatenelvkkcercyseivkfhnawekiyyrtdqiavykdfyrqlsrkarfdagkqnsqlitlaslcgmyqgaklsryitnywkdnitrqksflkdfsqqlhqytraleksdkahtkpnlinfnktfmvlanlvneiviplsngaisfpniskledgeeshliefalndysqlseligelkdaiatnggytpfakvtlnhytaeqkphvfkndidakirelkliglvetlkgksseqieeyfsnldkfstyndrnqsvivrtqcfkykpipflvkhqlakyisepngwdedavakvldavgairspahdyannqegfdlnhypikvafdyaweqlanslyttvtfpqemcekylnsiygcevskepvfkfyadllyirknlavlehknnlpsnqeefickinntfenivlpYkisqfetykkdilawindghdhkkytdakqqlgfirgglkgrinpytkltnefkqisstygktfaelrdkfkekneitkithfgiiiedknrdryllaselkheqinhvstilnkldkssefityqvksltsktlikliknhttkkgaispyadfhtsktgfnkneieknwdnykreqvlveyvkdcltdstmaknqnwaefgwnfekcnsyedieheidqksyllqsdtiskqsiaslveggclllpiinqditskerkdknqfskdwnhifegskefrlhpefavsyrtpiegypvqkrygrlqfvcafnahivpqngefinlkkqienfndedvqkrnvtefnkkvnhalsdkeyvvigidrglkqlatlcvldkrgkilgdfeiykkefvraekrseshwehtqaetrhildlsnlrvettiegkkvlvdqsltlvkknrdtpdeeateenkqkiklkqlsyirklqhkmqtneqdvldlinnepsdeefkkrieglissfgegqkyadlpintmremisdlqgviargnnqteknkiieldaadnlkqgivanmigivnyifakysykayisledLsRAYggaKsgydgrYlpstSqdedvdFkeqQnqmlaglgtyqffemqllkklqkiqsdntvlrfvpafrsadnyrnilrleetkykskpfgvvhfidPKftskkcpvcsktnvyrdkddilvckecgfrsdsqlkerennihyihngddngayhialksvenliqmk
interface signature	YLRAYKYSFQPK

Estimated binding specificities ?

contact

# IC=4.475 IC/col=0.895 n_of_columns=5

specificity:

A |  96  96  96  54  57
C |   0   0   0  16  13
G |   0   0   0  13  13
T |   0   0   0  13  13

scan!

home
updated Wed Dec 20 02:11:39 2023