8dfa_ABCDEIJ : 3D-footprint complex

structure name	TYPE I-C CASCADE BOUND TO SSDNA TARGET
experiment	NMR
reference complex	8dfa_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8dfa_A interface= tygirlrvwgdyacftrpemkvervsydvmppsaargileaihwkpairwivdrihvlrpivfdnvrrnevsskipkpnpatamrdrkplyflvddgsnrqqraatllrnvdyvieahfeltdkagaednagkhldifrrraragqsfqqpclgcrefpasfellegdvplscyagekrdlgymlldidferdmtplffkavmedgvitppsrtspevra > 8dfa_B interface=140,153,154,155, mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytdakrvtdwmctnfydirtfgavmttevncgqvrgpvqmafarsvepvvpqevsitRmavttkaeaednRTMgrkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml > 8dfa_C interface=122,124,131,156,160,169,170,171,173, mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytacdlkpepkklpkkvedakrvtdwmctnfydirtfgaVmTtevncgQvrgpvqmafarsvepvvpqevsitRmavTtkaeaednRTMgRkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml > 8dfa_D interface=131,156,168,170,171, mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytacdlkpepkklpkkvedakrvtdwmctnfydirtfgavmttevncgQvrgpvqmafarsvepvvpqevsitRmavttkaeaedNrTMgrkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml > 8dfa_E interface=124, mtaianryefvllfdvengnpngdpdagnmpridpetghglvtdvclkrkirnhvaltkegaerfniyiqekailnetheraytacdlkpepkklpkkvedakrvtdwmctnfydirtfgavmTtevncgqvrgpvqmafarsvepvvpqevsitrmavttkaeaednrtmgrkhivpyglyvahgfisaplaektgfsdedltlfwdalvnmfehdrsaarglmssrklivfkhqnrlgnapahklfdlvkvsraegssgparsfadyavtvgqapegvevkeml > 8dfa_I interface=222,326,362, lqalhgyyqrmsadpdagmppylcgqclitgerqkpiaqlhpsikggrdgvrgaqavasivsfnntafesygkeqsinapvsqeaafsyvtalnyllnpsnrqkvtiadatvvfwaersspaedifagmfdpprmhdllvairsgkratdimpdmdesvrfhvlglspnaarlsvrfwevdtvghmldkvgrhyreleiipqfnneqefpslstllrqtavLnktenispvlagglframltggpypqsllpavlgriraeharpedksryrlevvtyyraalikaylirnrklevpvsldpartdrpyllgrlfavlekaqedaVpganatikdrylasasanpgqvfhmllknasnhtaKlrkdperkaihyeimmqeiidnisdfpvtmssdeqglfmigyyhqrkalftkk > 8dfa_J interface=32,33, vsldpartdrpyllgrlfavlekaqedavpgANatikdrylasasanpgqvfhmllknasnhtaklrkdperkaihyeimmqeiidnisdfpvtmssdeqglfmigyyhqrkalftk
interface signature	/RRTM/VTQRTRTMR/QRNTM/T/LVK/AN

Estimated binding specificities ?

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# IC=14.667 IC/col=0.863 n_of_columns=17

specificity:

A |   0   0   0  24   0  67   0   0   9   0  24  24   0   0  69  24   0
C |   0  96   0  24  96  11   0  96  67   0  24  24   0  96   9  24   0
G |   0   0  96  24   0   9  96   0  11   0  24  24  96   0   9  24  96
T |  96   0   0  24   0   9   0   0   9  96  24  24   0   0   9  24   0

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updated Wed Jan 7 20:45:24 2026