8dlf_ABCD : 3D-footprint complex

Interface of input file ?

structure name	EBNA1 DNA BINDING DOMAIN (DBD) (458-617)+2 REPEATS OF FAMILY REPEAT (FR) REGION
experiment	NMR
structural superfamily	Viral DNA-binding domain;
reference complex	7u1t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8dlf_A interface=2,3,4,7,8,12,20,58,61,62, rRKKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggskTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega > 8dlf_B interface=6,7,11,19,20,57,60,61,64, rkkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggskTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve > 8dlf_C interface=3,7,8,12,20,21,57,58,61,62,65, rrKkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmv > 8dlf_D interface=1,4,9,17,54,55,58,59, KggWfgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega
interface signature	RKKWFRKTYN/WFRKFTYNR/KWFRKFKTYNR/KWRKKTYN

Estimated binding specificities ?

readout + contact

# IC=30.749 IC/col=0.668 n_of_columns=46

specificity:

A |   0   0   0  85   1  86  96   0  24  24  19   0   0  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   1   0   3   0  96   0   1  24  24  24   0   1   0   1  94   0   7
C |   0   0   0   5   3   3   0   1  24  24   1  96   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   1   0   1   0   0   1  84  24  24  24   0   1  96   1   0  32  77
G |  95  96   0   3  91   0   0   1  24  24  61   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16  96  89   0   0  94   8  24  24  24  96  93   0   2   1   0   5
T |   1   0  96   3   1   7   0  94  24  24  15   0  96   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  78   0   3  96   0   1   3  24  24  24   0   1   0  92   1  64   7

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updated Wed Jan 7 20:55:24 2026