8dlf_ABCD : 3D-footprint complex

Interface of input file ?

structure name	EBNA1 DNA BINDING DOMAIN (DBD) (458-617)+2 REPEATS OF FAMILY REPEAT (FR) REGION
experiment	NMR
structural superfamily	Viral DNA-binding domain;
reference complex	7u1t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8dlf_A interface=2,3,4,7,8,12,20,58,61,62, rRKKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggskTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega > 8dlf_B interface=6,7,11,19,20,57,60,61,64, rkkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggskTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve > 8dlf_C interface=3,7,8,12,20,21,57,58,61,62,65, rrKkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmv > 8dlf_D interface=1,4,9,17,54,55,58,59, KggWfgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega
interface signature	RKKWFRKTYN/WFRKFTYNR/KWFRKFKTYNR/KWRKKTYN

Estimated binding specificities ?

readout + contact

# IC=29.456 IC/col=0.640 n_of_columns=46

specificity:

A |   8  21   0  92   0   1   0  24  24  24   5   1   0  96   7   0  84  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96   0  96   0   7  24  24  92   0  24   0   5  96   0   4
C |   1   0   0   2   0  94  96  24  24  24   9  88   0   0  84  96  10  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   0  76  24  24   1   0  24  86   7   0  96  88
G |  84  75   0   1  96   0   0  24  24  24  76   6   0   0   1   0   1  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0  96   6  24  24   3   1  24   9   0   0   0   1
T |   3   0  96   1   0   1   0  24  24  24   6   1  96   0   4   0   1  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  96   0   0   7  24  24   0  95  24   1  84   0   0   3

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updated Fri Aug 1 06:11:41 2025