8dlf_ABCD : 3D-footprint complex

Interface of input file ?

structure name	EBNA1 DNA BINDING DOMAIN (DBD) (458-617)+2 REPEATS OF FAMILY REPEAT (FR) REGION
experiment	NMR
structural superfamily	Viral DNA-binding domain;
reference complex	7u1t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8dlf_A interface=2,3,4,7,8,12,20,58,61,62, rRKKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggskTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega > 8dlf_B interface=6,7,11,19,20,57,60,61,64, rkkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggskTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve > 8dlf_C interface=3,7,8,12,20,21,57,58,61,62,65, rrKkggWFgkhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmv > 8dlf_D interface=1,4,9,17,54,55,58,59, KggWfgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmvega
interface signature	RKKWFRKTYN/WFRKFTYNR/KWFRKFKTYNR/KWRKKTYN

Estimated binding specificities ?

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# IC=29.750 IC/col=0.647 n_of_columns=46

specificity:

A |   3  34   0  90   0   1   0  24  24  24   7   1   0  96   8   0  87  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96   0  96   0   9  24  24  92   0  24   0   3  96   0   1
C |   1   1   0   0   0  94  96  24  24  24   5  93   0   0  86  96   9  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0   0  65  24  24   0   0  24  88   1   0  96  92
G |  86  61   0   3  96   1   0  24  24  24  67   1   0   0   1   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0  96  17  24  24   4   0  24   7   1   0   0   2
T |   6   0  96   3   0   0   0  24  24  24  17   1  96   0   1   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  96   0   0   5  24  24   0  96  24   1  91   0   0   1

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updated Sun Dec 15 23:34:01 2024