8dq1_CD : 3D-footprint complex

structure name	QUORUM-SENSING RECEPTOR RHLR BOUND TO PQSE
experiment	NMR
structural superfamily	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors;C-terminal effector domain of the bipartite response regulators;
reference complex	8dq1_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8dq1_C interface=210,211,213,214,215,217, mrndggfllwwdglrsemqpihdsqgvfavlekevrrlgfdyyaygvrhtipftrpktevhgtypkawleryqmqnygavdpailnglrssemvvwsdslfdqsrmlwneardwglcvgatlpirapnnllsvlsvardqqnissfereeirlrlrcmielltqkltdlehpmlmsnpvclshrereilqwtadgkssgeiaiilsiseSTvNFHhKniqkkfdapnktlaaayaaalgli > 8dq1_D interface=207,210,211,214, dggfllwwdglrsemqpihdsqgvfavlekevrrlgfdyyaygvrhtipftrpktevhgtypkawleryqmqnygavdpailnglrssemvvwsdslfdqsrmlwneardwglcvgatlpirapnnllsvlsvardqqnissfereeirlrlrcmielltqkltdlehpmlmsnpvclshrereilqwtadgkssgeiaiilsiseStvNFhhKniqkkfdapnktlaaayaaalgli
interface signature	STNFHK/SNFK

Estimated binding specificities ?

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# IC=8.764 IC/col=0.584 n_of_columns=15

specificity:

A |   0   0   4   5  24  24  24  24  24  24   0  21  96  21   0
C |   0   5   4   0  24  24  24  24  24  24   0  43   0   4   0
G |   0  91   1  91  24  24  24  24  24  24  96  19   0  54   5
T |  96   0  87   0  24  24  24  24  24  24   0  13   0  17  91

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updated Wed Jan 7 20:56:30 2026