8eaj_ABCDEF : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Sat Jun 27 07:29:38 2026

structure name	SSOMCM HEXAMER BOUND TO MG/ADP-BEFX AND 46-MER DNA STRAND. CLASS 1
experiment	NMR
structural superfamily	Nucleic acid-binding proteins;P-loop containing nucleoside triphosphate hydrolases;
reference complex	8eaf_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8eaj_A interface=364, qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm > 8eaj_B interface=364,371, qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm > 8eaj_C interface=364,371, qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeYyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm > 8eaj_D interface=364, qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm > 8eaj_E interface= qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvRekgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm > 8eaj_F interface=366, qidyrdvfieflttfkgnnnqnkyierinelvayrkksliiefsdvlsfnenlayeiinntkiilpilegalydhilqldptyqrdiekvhvrivgiprvielrkirstdigklitidgilvkvtpvkeriykatykhihpdcmqefewpedeempevlempticpkcgkpgqfrlipektklidwqkaviqerpeevpsgqlprqleiileddlvdsarpgdrvkvtgildikqdspvkrgsravfdiymkvssievsseedekkikdlakdpwirdriissiapsiyghwelkealalalfggvpkvledtrirgdihiliigdpgtaksqmlqfisrvapravyttgkgstaagltaavvreKgtgeyyleagalvladggiavideidkmrdedrvaiheameqqtvsiakagivaklnaraaviaagnpkfgryiserpvsdninlpptilsrfdlifilkdqpgeqdrelanyildvhsgkstkniididtlrkyiayarkyvtpkitseaknlitdffvemrkkssetpdspilitprqlealiriseayakmalkaevtredaerainimrlflesvgvdm