8efv_ABCD : 3D-footprint complex

structure name	STRUCTURE OF SINGLE HOMO-HEXAMERIC HOLLIDAY JUNCTION ATP-DEPENDENT DNA HELICASE RUVB MOTOR
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;"Winged helix" DNA-binding domain;
reference complex	8efv_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8efv_A interface=296, alrpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaiekpgdlaailansleegdilfideihrlsrqaeehlypamedfvmdivigqgpaartirlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp > 8efv_B interface= edlalrpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmdivigqgpaartirlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtPrgrvatelayrhlgyppp > 8efv_C interface=284, edlalrpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmrlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp > 8efv_D interface=279, rpktldeyigqerlkqklrvyleaakarkeplehlllfgppglgkttlahviahelgvnlrvtsgpaipgdlaailansleegdilfideihrlsrqaeehlypamedfvmrlelprftligattrpglitapllsrfgivehleyytpeelaqgvmrdarllgvriteeaaleigrrsrgtmrvakrlfrrvrdfaqvageevitreralealaalgldelglekrdreilevlilrfgggpvglatlatalsedpgtleevhepylirqgllkrtpRgrvatelayrhlgyppp
interface signature	R/P/R/R

Estimated binding specificities ?

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# IC=5.300 IC/col=0.663 n_of_columns=8

specificity:

A |  11  11  96  67  24  24   0   0
C |  67  67   0  11  24  24   0  96
G |   9   9   0   9  24  24  96   0
T |   9   9   0   9  24  24   0   0

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updated Sat Jun 27 07:42:56 2026