8f6b_ACD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MURINE POLG2 HEXAMER BOUND TO DNA
reference	Wojtaszek et al. 'Nucleic 51 9716 2023
experiment	X-ray (resolution=2.75, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8f6b_A interface= varealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgrknvvpcvlsvsgdvdlgtlaylydsfqlaelqrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnvaaal > 8f6b_C interface=304,337, varealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvtrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgrknvvpcvlsvsgdvdlgtlaylydsfqqrkvlklhpclapikvaldvgKgptvelrqvcqgllnellengisvwpgysetvHssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnvaaal > 8f6b_D interface=253, ealvdlcrrrhflsgtpqqlstaallsgcharfgplgvelrknlasqwwssmvvfreqvfavdslhqepgssqprdsafrlvspesireilqdrepskeqlvaflenllktsgklratllhgalehyvncldlvnrklpfglaqigvcfhpvstrvgekteaslvwftptrtssqwldfwlrhrllwwrkfamspsnfssadcqdelgrkgsklyysfpwgkepietlwnlgdqellhtypgnvstiqgrdgRknvvpcvlsvsgdvdlgtlaylydsfqlaensfarkkslqrkvlklhpclapikvaldvgkgptvelrqvcqgllnellengisvwpgysetvhssleqlhskydemsvlfsvlvtettlengliqlrsrdttmkemmhisklrdflvkylasasnvaaal
interface signature	/KH/R

Estimated binding specificities ?

readout + contact

# IC=1.430 IC/col=0.079 n_of_columns=18

specificity:

A |  24  24  14  12  13  49  13  24  24  16  17  24  24  24  24  24  24  24
C |  24  24  14  12  13  17  13  24  24  19  49  24  24  24  24  24  24  24
G |  24  24  54  60  14  15  56  24  24  45  15  24  24  24  24  24  24  24
T |  24  24  14  12  56  15  14  24  24  16  15  24  24  24  24  24  24  24

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updated Sun Dec 17 22:58:05 2023