8fcj_AI : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF CASCADE-DNA (P23) COMPLEX IN TYPE I-B CAST SYSTEM
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8fcj_A interface=78, miaplilyldvpfttfresharemgktypvpppatvygmllslvgetnvyrhcgvelaiamlsspkksrilrqmrrfKnadfshpenvipcyqeilsnlkcliwvrsdeekiqpslreriqlafdhpelvrrfgclflgesdqliktiklaredylegvrqwairdnrgrltlpywvdhvgsrntrflryrieemdrlsppdlawtmvqspi > 8fcj_I interface=112,113,114,180,294,295, tqpkislslhaadttimhrvgmtglymtlkrlekqyplsrqrgghiswfltadtielfwegsdfialswlinesfqlddtglihlvgldndridlrqkihihegicgvflrLNKfyqageiintelrfeekqveyqyksltwyahqtfaeklceadtqqlrhdyiqitswlylggivrhArtqnttkleekpeyalallfvpvvchycllhipsedlkerkphrylvvipeikdfedasqrrwrlqqletkqfhvsslgeagllyyslddiqpevayyqacqvwlyektnkasRQrtlmsieeikidknilityqqvqkyfktnyqiikykqifikvnpirsliadnlvkgihwwsnfweklviedskeylfnqlfsnregfiimaenseedkqylifikvfqqamkgnfakiyakteegkdppikkkverlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykp
interface signature	K/LNKARQ

Estimated binding specificities ?

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# IC=3.029 IC/col=0.303 n_of_columns=10

specificity:

A |   0  96  12  19  24  24  24  24  24  24
C |  96   0  12  19  24  24  24  24  24  24
G |   0   0  12  39  24  24  24  24  24  24
T |   0   0  60  19  24  24  24  24  24  24

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updated Sun Dec 17 22:59:31 2023