8fcj_CDEFGHKL : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF CASCADE-DNA (P23) COMPLEX IN TYPE I-B CAST SYSTEM
experiment	NMR
reference complex	8fcj_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8fcj_C interface=98, pnyylygtvltryglaslnhdirrgnktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgrekdstslhfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl > 8fcj_D interface=98,101,133,134, pnyylygtvltryglaslnhdirrgnktilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnQrmgalgmnmavsltpydgavklgaksgrekdSTslhfteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl > 8fcj_E interface=23,26,28,98,132,134,137,138,139,140,141, pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLestpnqrmgalgmnmavsltpydgavklgaksgReKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl > 8fcj_F interface=23,26,28,98,131,134,135,136,137,138, pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl > 8fcj_G interface=22,23,26,28,98,135,138,139,140,141,142, pnyylygtvltryglaslnhdIRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfalLesstpnqrmgalgmnmavsltpydgavklgaksgreKdsTSLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgl > 8fcj_H interface=23,26,28,137,143,146,148,149,150, pnyylygtvltryglaslnhdiRrgNkTilqkgywnngkihsfvgssairwalrfylqkqgylvnrvwdeeehinrltsedfdpekfydddifgfallesaeteedtsstpnqrmgalgmnmavsltpydgavklgAksgreKdsTsLHFteyhatryqyyfgidathlkdfsrilpmidgimnlpkvggssnifnypfcpdslvfqwtnhfasyisycfeycdpkskeaklsqefidevecgqidpsklwiggtivkdlqqldnfessplnkahiyrnrnemiealktvikrdlgle > 8fcj_K interface=44, nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd > 8fcj_L interface=44, nseedkqylifikvfqqamkgnfakiyakteegkdppikkkveRlraelnycydelsfkeylsdflvrgglnkyfnehqeeiallikkspwqeiriwsllaiasykpkd
interface signature	L/LQST/RNTLRKTSLHF/RNTLKTSLHF/IRNTLKTSLHF/RNTAKTLHF/R/R

Estimated binding specificities ?

contact

# IC=32.760 IC/col=1.260 n_of_columns=26

specificity:

A |   9  96  96   0  96   0   0   0   0   0   0   0   0  96  12   0  96  96  96   0   0  96   0   0   0   0
C |   9   0   0  96   0   0   0   0   0  96  96   0   0   0  12   0   0   0   0   0   0   0  96   0   0  96
G |   9   0   0   0   0  96   0  96  96   0   0   0   0   0  12   0   0   0   0   0  96   0   0   0   0   0
T |  69   0   0   0   0   0  96   0   0   0   0  96  96   0  60  96   0   0   0  96   0   0   0  96  96   0

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updated Thu Sep 12 00:21:08 2024