8ffi_IL : 3D-footprint complex

structure name	STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ffi_I interface=262,357,361, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8ffi_L interface=209,290,397, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/KYM

Estimated binding specificities ?

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# IC=2.134 IC/col=0.107 n_of_columns=20

specificity:

A |  24  24  24  24  24  74  21  24  24  19  24  24  24  12  16  19  21  24   2  24
C |  24  24  24  24  24   7  21  24  24  20  24  24  24  12  45  39  21  24  88  24
G |  24  24  24  24  24   7  33  24  24  19  24  24  24  60  16  19  31  24   4  24
T |  24  24  24  24  24   8  21  24  24  38  24  24  24  12  19  19  23  24   2  24

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updated Sun Dec 17 23:08:19 2023