8ffi_MN : 3D-footprint complex

structure name	STRUCTURE OF TETRAMERIZED MAPSPARTA UPON GUIDE RNA-MEDIATED TARGET DNA BINDING
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ffi_M interface=262,357,361, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8ffi_N interface=72, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/R

Estimated binding specificities ?

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# IC=1.753 IC/col=0.088 n_of_columns=20

specificity:

A |  24  24  24  24  24  96  16  24  24  24  24  24  24  16  16  21  24  21  24  24
C |  24  24  24  24  24   0  16  24  24  24  24  24  24  16  48  31  24  23  24  24
G |  24  24  24  24  24   0  45  24  24  24  24  24  24  48  16  21  24  21  24  24
T |  24  24  24  24  24   0  19  24  24  24  24  24  24  16  16  23  24  31  24  24

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updated Sun Dec 17 23:08:32 2023