8gkh_P : 3D-footprint complex

structure name	STRUCTURE OF THE SPIZELLOMYCES PUNCTATUS FANZOR (SPUFZ) IN COMPLEX WITH OMEGA RNA AND TARGET DNA
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8gkh_P interface=79,83,112,113,116,117,261,263,274,328, ptlhtcnktsfakaflpnetyrqrlldyiaiihqladhashalkfyilststssfpvvhedtieailyllnkgeawhpRkeaKkawrdcllpyvqrycqivgfihpnlrgeQQsiNYltvsmmtnlkvnvqehfmqmllryinlrfdvkgqkqrlppksdarkafftrlrylksvflfdvvpeleflddltplesevleeiwsldlpflpndplayaivadpmsffpaycklsglyeqygfqrfsaiplrrsliqshvriDtIilyqhilcitRrdaetvekddlwmrvcnlctkafrsrcgmhfegsittdgasvsvylkhpeadkYkalyvennlpacraaenvvvidpnkrdilycqdsngttfrytanqravetgsrrfakrreamkeeagvdliesripshktmnlmdftryllvrradwdrrkefyshpahtrwkwhsfinrqksesdlisnmrnkygenftvvmgdwsdagrtarfqtssktkgwrtlfkrnridcflldeyktssvcprcsssefvekkfktrphsrpwrrregkiekvhgllgctnpnclqqawtsgmrywnrdmlstcnmllivrsmldghgrpevfsrs
interface signature	RKQQNYDIRY

Estimated binding specificities ?

contact

# IC=4.671 IC/col=0.311 n_of_columns=15

specificity:

A |   0  92   2   2  15  24  24  24  24  24  24  24  24  24  24
C |   0   2   2   2  49  24  24  24  24  24  24  24  24  24  24
G |   0   1   4  90  17  24  24  24  24  24  24  24  24  24  24
T |  96   1  88   2  15  24  24  24  24  24  24  24  24  24  24

scan!

home
updated Wed Dec 20 02:48:05 2023