legend  pdf

interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

home
updated Thu Jan 8 01:39:13 2026

structure name	CRYSTAL STRUCTURE OF THE GP32-DDA-DT17 COMPLEX
reference	White et al. 'To ? ? ?
experiment	X-ray (resolution=4.98, R-factor=?)
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;Nucleic acid-binding proteins;
reference complex	3upu_A 8gme_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8gme_A interface=9,12,48,49,51, ssedkgewKlkLdnagngqavirflpskndeqapfailvnhgfkkngKWyIetcssthgdydscpvcqyiskndlyntdnkeyslvkrktsywanilvvkdpaapenegkvfkyrfgkkiwdkinamiavdvemgetpvdvtcpweganfvlkvkqvsgfsnydeskflnqsaipniddesfqkelfeqmvdlsemtskdkfksfeelntkfgqvmgtavmggaaataakkadkvaddldafnvdd > 8gme_C interface=82,149,150,152,240,396,415, mtfddltegqknafnivmkaikekkhhvtingpagtgattltkfiiealistgetgiilaapthaakkilsklsgkeastiHsilkinpvtyeenvlfeqkevpdlakcrvlicdevsmydrklfkillstippwctiigigdnkqirPVdPgentayispffthkdfyqceltevkrsnapiidvatdvrngkwiydkvvdghgvrgftgdtalrdfmvnyfsivkslddlfenrvmaFtnksvdklnsiirkkifetdkdfivgeiivmqeplfktykidgkpvseiifnngqlvriieaeytstfvkargvpgeylirhwdltvetygddeyyrekikiissdeelykfnlflgktaetyknwnkggkapwsdfwdaksqfskvkalpastfHkaqgmsvdrafiytpcihYadvelaqqllyvgvtrgrydvfyv