interface graph thumbnail
legend  pdf

structure nameZEBRAFISH IRF-11 DBD COMPLEX WITH DNA
(Interferon regulatory factor)
referenceOuyang et al. 'J ? ? 2024
sourceDanio rerio
experimentX-ray (resolution=2.59, R-factor=0.236)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyInterferon regulatory factor transcription f;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHANRCS

Estimated binding specificities ?

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# IC=3.455 IC/col=0.576 n_of_columns=6 specificity:   
A |  11  22   5  24   0  79
C |  63   7   5  24  96   7
G |  11  11   5  24   0   5
T |  11  56  81  24   0   5
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updated Tue Jun 30 16:32:43 2026