interface graph thumbnail
legend  pdf

structure nameZEBRAFISH IRF-11 DBD COMPLEX WITH DNA
(Interferon regulatory factor)
referenceOuyang et al. 'J ? ? 2024
sourceDanio rerio
experimentX-ray (resolution=2.59, R-factor=0.236)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyInterferon regulatory factor transcription f;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHANRCS

Estimated binding specificities ?

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# IC=3.223 IC/col=0.537 n_of_columns=6 specificity:   
A |  12   0   6  24   6  84
C |  66  18   6  24  78   0
G |   6  12   6  24   6   6
T |  12  66  78  24   6   6
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updated Mon Aug 4 01:03:11 2025