interface graph thumbnail
legend  pdf

structure nameZEBRAFISH IRF-11 DBD COMPLEX WITH DNA
(Interferon regulatory factor)
referenceOuyang et al. 'J ? ? 2024
sourceDanio rerio
experimentX-ray (resolution=2.59, R-factor=0.236)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyInterferon regulatory factor transcription f;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHANRCS

Estimated binding specificities ?

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# IC=3.549 IC/col=0.591 n_of_columns=6 specificity:   
A |   0   5  24  96  40  20
C |   0   5  24   0  15  10
G |   5  80  24   0  20  56
T |  91   6  24   0  21  10
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updated Wed Dec 18 18:12:28 2024