8hhl_A : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE CAS12M2-CRRNA-TARGET DNA FULL R-LOOP COMPLEX
experiment	NMR
redundant complexes	8hhm_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hhl_A interface=4,47,82,85,98,108,115,116,119,127,130,141,152,156,160,163,164,168,173,174,177,178,180,195,197,199,299,320,486,487,491,492,494,495,496,498,499,502,503,506,507,510,543,563, mttMtvhtmgvhykwqipevlrqqlwlahnlredlvslqlaydddlKaiwssypdvaqaedtmaaaeadavalservkqarIeaRskkisteltqqlRdakkrlkdaRqarrdaIAvvKddaaerrKarSdqlaadqkalYgqycrdgdlyWasfNtvlDhhKTavkRiaaqRAsgKPaTlrhhrfdgsgtiavQlQrQagapprtpmvladeagkyrnvlhipgwtdpdvweqmtrsqcrqsgrvtvrmrcgstdgqpqwidlpvqvhrwlpadaditgaelvvtrvagiyraklcvTarigdtepvtsgptvalhlgWrsteegtavatwrsdapldipfglrtvmrvdaagtsgiivvpatierrltrteniassrslaldalrdkvvgwlsdndaptyrdapleaatvkqwkspqrfaslahawkdngteisdilwawfsldrkqwaqqengrrkalghrddlyrqiaavisdqaghvlvdDTsvaELsARAmERteLPteVQqkIdrrrdhaapgglrasvvaamtrdgvpvtivaaAdftrthsrcghvnpaddryLsnpvrcdgcgamydqdrsfvtlmlraata
interface signature	MKIRRRIAKKSYWNDKTRRAKPTQQQTWDTELARAERLPVQIAL

Estimated binding specificities ?

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# IC=18.104 IC/col=0.823 n_of_columns=22

specificity:

A |   1   0   0   0   0  13  27  19  85   0  20  96   8   7   0  10  22  12   0   8   1   0
C |   1   0   0   0   0  13  25  19   5   0  20   0   8   4   0  13  30  12  96   8   1   0
G |   1   0   0  96  96  57  22  38   3   0  34   0  72  81   0  63  22  60   0  72   1  96
T |  93  96  96   0   0  13  22  20   3  96  22   0   8   4  96  10  22  12   0   8  93   0

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updated Wed Dec 20 03:30:41 2023