8hhl_A : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE CAS12M2-CRRNA-TARGET DNA FULL R-LOOP COMPLEX
experiment	NMR
redundant complexes	8hhm_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hhl_A interface=4,47,82,85,98,108,115,116,119,127,130,141,152,156,160,163,164,168,173,174,177,178,180,195,197,199,299,320,486,487,491,492,494,495,496,498,499,502,503,506,507,510,543,563, mttMtvhtmgvhykwqipevlrqqlwlahnlredlvslqlaydddlKaiwssypdvaqaedtmaaaeadavalservkqarIeaRskkisteltqqlRdakkrlkdaRqarrdaIAvvKddaaerrKarSdqlaadqkalYgqycrdgdlyWasfNtvlDhhKTavkRiaaqRAsgKPaTlrhhrfdgsgtiavQlQrQagapprtpmvladeagkyrnvlhipgwtdpdvweqmtrsqcrqsgrvtvrmrcgstdgqpqwidlpvqvhrwlpadaditgaelvvtrvagiyraklcvTarigdtepvtsgptvalhlgWrsteegtavatwrsdapldipfglrtvmrvdaagtsgiivvpatierrltrteniassrslaldalrdkvvgwlsdndaptyrdapleaatvkqwkspqrfaslahawkdngteisdilwawfsldrkqwaqqengrrkalghrddlyrqiaavisdqaghvlvdDTsvaELsARAmERteLPteVQqkIdrrrdhaapgglrasvvaamtrdgvpvtivaaAdftrthsrcghvnpaddryLsnpvrcdgcgamydqdrsfvtlmlraata
interface signature	MKIRRRIAKKSYWNDKTRRAKPTQQQTWDTELARAERLPVQIAL

Estimated binding specificities ?

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# IC=17.170 IC/col=0.780 n_of_columns=22

specificity:

A |   0  92   8   0  12  22  10  96   4   8   0  20  96   5  19  22  13   0   8  96  96  92
C |  96   1  70   0  60  25  63   0  84  70   0  34   0   3  39  25  56  96  70   0   0   1
G |   0   1  10  96  12  27  10   0   4   8   0  22   0   3  19  22  14   0   8   0   0   2
T |   0   2   8   0  12  22  13   0   4  10  96  20   0  85  19  27  13   0  10   0   0   1

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updated Sat Sep 14 10:48:20 2024