8hhl_A : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE CAS12M2-CRRNA-TARGET DNA FULL R-LOOP COMPLEX
experiment	NMR
redundant complexes	8hhm_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hhl_A interface=4,47,82,85,98,108,115,116,119,127,130,141,152,156,160,163,164,168,173,174,177,178,180,195,197,199,299,320,486,487,491,492,494,495,496,498,499,502,503,506,507,510,543,563, mttMtvhtmgvhykwqipevlrqqlwlahnlredlvslqlaydddlKaiwssypdvaqaedtmaaaeadavalservkqarIeaRskkisteltqqlRdakkrlkdaRqarrdaIAvvKddaaerrKarSdqlaadqkalYgqycrdgdlyWasfNtvlDhhKTavkRiaaqRAsgKPaTlrhhrfdgsgtiavQlQrQagapprtpmvladeagkyrnvlhipgwtdpdvweqmtrsqcrqsgrvtvrmrcgstdgqpqwidlpvqvhrwlpadaditgaelvvtrvagiyraklcvTarigdtepvtsgptvalhlgWrsteegtavatwrsdapldipfglrtvmrvdaagtsgiivvpatierrltrteniassrslaldalrdkvvgwlsdndaptyrdapleaatvkqwkspqrfaslahawkdngteisdilwawfsldrkqwaqqengrrkalghrddlyrqiaavisdqaghvlvdDTsvaELsARAmERteLPteVQqkIdrrrdhaapgglrasvvaamtrdgvpvtivaaAdftrthsrcghvnpaddryLsnpvrcdgcgamydqdrsfvtlmlraata
interface signature	MKIRRRIAKKSYWNDKTRRAKPTQQQTWDTELARAERLPVQIAL

Estimated binding specificities ?

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# IC=24.104 IC/col=1.096 n_of_columns=22

specificity:

A |   0   0   0   0   0   0  24  21  96   0  21  96   0   0   0   0  24   0   0   0   0   0
C |   0   0   0   0   0   0  24  21   0   0  21   0   0   0   0   0  24   0  96   0   0   0
G |   0   0   0  96  96  96  24  33   0   0  42   0  96  96   0  96  24  96   0  96   0  96
T |  96  96  96   0   0   0  24  21   0  96  12   0   0   0  96   0  24   0   0   0  96   0

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updated Wed Dec 18 18:15:10 2024