8hnv_A : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF HPACAS9-SGRNA-DSDNA IN THE PRESENCE OF ACRIIC4
experiment	NMR
redundant complexes	8hnw_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hnv_A interface=512,644,645,687,689,690,692,694, knlnyilglalgiasvgwavveidekenplrlidvgvrtferaevpktgeslalsrrlarsarrltqrrvarlkkakrllksenillrlphqvwqlrvegldhklerqewaavllhlikhrgyallsgvdnnhkllqqatyrspaelavkkfeveeghirnqqgaythtfsrldllaemellfsrqqhfgnpfasekllenltallmwqkpalsgeailkmlgkctfedeykaakntysaerfvwitkrlalmeqpydknrlfysqvmemkayhqirkvlegnnlkaewaelkanptlldeigtafslyktdedisaylagklsqpvlnallenlsfdkfiqlslkalykllplmqqdeacreiynhhflpqipadeirnpvvlrtltqarkvingvvrlygsparihietgyvarflcnfiadnmhltgegkrkvfasngqitallrsrwglaksredndrhhaldavvvacsfkqeveirifsdnpklelvqplfvsrmptrkmtgqghMetvksakrlnegisvikmpltklklkdlelmvnrerekdlydtlkarleafnddpakafaepfikkggaivksvrveqiqksgvlvregngvadnasmvrvdvftkggkyflvpiytwqvakgilpnkaatQYkdeedwevmdnsatfkfslhpndlvklvtkkktilgyfnglNrATgNiDikehdldkskgkqgifegvgiklalsfekyqvdelgknirlckpskrqpvr
interface signature	MQYNATND

Estimated binding specificities ?

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# IC=2.665 IC/col=0.242 n_of_columns=11

specificity:

A |  27  24  24   3  14  31  16   7   6  20  24
C |  22  24  24   3  14  21  14   7   6  38  24
G |  25  24  24   3  52  23  14   8   6  19  24
T |  22  24  24  87  16  21  52  74  78  19  24

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updated Wed Dec 20 03:37:04 2023