8hov_ABCDEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HMS1P FROM SACCHAROMYCES CEREVISIAE
reference	Khan et al. 'To ? ? ?
experiment	X-ray (resolution=2.77, R-factor=?)
structural superfamily	HLH, helix-loop-helix DNA-binding domain;
reference complex	8hov_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hov_A interface=2,3,5,6,9,10, sHNiIEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_B interface=2,3,5,6,9,10, sHNiIEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_C interface=4,7,8, niiEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_D interface=6,9,10, shniiEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_E interface=2,3,5,6,9,10,58, sHNiIEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnKasiltksieyichlerkclqlslanqhl > 8hov_F interface=4,7,8, niiEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqh
interface signature	HNIEYR/HNIEYR/EYR/EYR/HNIEYRK/EYR

Estimated binding specificities ?

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# IC=25.366 IC/col=1.103 n_of_columns=23

specificity:

A |   9   0  96   0   0  11  96  24  24   0   9   0   0   0   0  96   0   0  96   0   0   0  96
C |   9  96   0  96   0  67   0  24  24   0   9  96   0   0   0   0   0  96   0  96   0  96   0
G |   9   0   0   0  96   9   0  24  24   0  69   0  96   0  96   0   0   0   0   0  96   0   0
T |  69   0   0   0   0   9   0  24  24  96   9   0   0  96   0   0  96   0   0   0   0   0   0

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updated Mon Dec 16 04:13:55 2024