8hov_ABCDEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HMS1P FROM SACCHAROMYCES CEREVISIAE
reference	Khan et al. 'To ? ? ?
experiment	X-ray (resolution=2.77, R-factor=?)
structural superfamily	HLH, helix-loop-helix DNA-binding domain;
reference complex	8hov_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8hov_A interface=2,3,5,6,9,10, sHNiIEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_B interface=2,3,5,6,9,10, sHNiIEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_C interface=4,7,8, niiEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_D interface=6,9,10, shniiEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqhls > 8hov_E interface=2,3,5,6,9,10,58, sHNiIEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnKasiltksieyichlerkclqlslanqhl > 8hov_F interface=4,7,8, niiEkkYRsnindkieqlrrtvptlrvaykkcndlpitsrdladldglepatklnkasiltksieyichlerkclqlslanqh
interface signature	HNIEYR/HNIEYR/EYR/EYR/HNIEYRK/EYR

Estimated binding specificities ?

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# IC=23.038 IC/col=1.047 n_of_columns=22

specificity:

A |   4   8   0   0   0   0  89   0   0  96   0   4  24   7   2  75   1  15   0   0   0   0
C |   4  11  96   0   0   0   3   0  96   0  96  60  24   2   5   6  17   2  96   0   0   0
G |   6  73   0  96   0  96   4   0   0   0   0  29  24  87   2  11   0  77   0  96   0  96
T |  82   4   0   0  96   0   0  96   0   0   0   3  24   0  87   4  78   2   0   0  96   0

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updated Fri Aug 1 11:03:19 2025