8i87_CD : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8i87_C interface=261,356,360, nkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni > 8i87_D interface=290,397, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvnydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/YM

Estimated binding specificities ?

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# IC=2.240 IC/col=0.132 n_of_columns=17

specificity:

A |  24  24  24   7  38  24  24  21  24  24  24  21  96  14  21  24  24
C |  24  24  24  74  19  24  24  33  24  24  24  21   0  54  31  24  24
G |  24  24  24   7  20  24  24  21  24  24  24  21   0  14  21  24  24
T |  24  24  24   8  19  24  24  21  24  24  24  33   0  14  23  24  24

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updated Mon Dec 18 00:52:11 2023