8i87_FG : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8i87_F interface=205,208,211,288, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkenydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi > 8i87_G interface=253,348,352, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni
interface signature	FIHY/RHR

Estimated binding specificities ?

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# IC=3.130 IC/col=0.165 n_of_columns=19

specificity:

A |  24  24  24  24  19  60  24  24  19  24  24  24  24  96  19  24  24   0  24
C |  24  24  24  24  38  12  24  24  38  24  24  24  24   0  39  24  24  96  24
G |  24  24  24  24  19  12  24  24  20  24  24  24  24   0  19  24  24   0  24
T |  24  24  24  24  20  12  24  24  19  24  24  24  24   0  19  24  24   0  24

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updated Mon Dec 18 00:51:49 2023