8i87_OT : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF TIR-APAZ/AGO-GRNA-DNA COMPLEX
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8i87_O interface=261,356,360, nkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemeekvfvsnepvkfkgnvsyni > 8i87_T interface=72,249,290,397, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvnydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/RKYM

Estimated binding specificities ?

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# IC=2.412 IC/col=0.142 n_of_columns=17

specificity:

A |  24  24  31   4  31  24  24  19  21  24  24  24  96  14  21  23  24
C |  24  24  21  81  23  24  24  38  23  24  24  24   0  52  31  21  24
G |  24  24  21   7  21  24  24  19  21  24  24  24   0  14  23  21  24
T |  24  24  23   4  21  24  24  20  31  24  24  24   0  16  21  31  24

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updated Mon Dec 18 00:52:21 2023