8j0k_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN TFAP2A IN COMPLEX WITH DNA
reference	Xiao et al. 'Nucleic 51 8270 2023
source	Homo sapiens
experiment	X-ray (resolution=2.10, R-factor=?)
reference complex	8j0k_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8j0k_A interface=19,53,54, vvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkmylsn > 8j0k_B interface=19,53,54, vvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkm
interface signature	SAK/SAK

Estimated binding specificities ?

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# IC=6.778 IC/col=0.753 n_of_columns=9

specificity:

A |   0   0  12  10  24  24   0   0   0
C |   0  96  53  55  24  24  10   0  96
G |  96   0  21  21  24  24  85  96   0
T |   0   0  10  10  24  24   1   0   0

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updated Thu Sep 12 03:17:36 2024