8j0k_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HUMAN TFAP2A IN COMPLEX WITH DNA
reference	Xiao et al. 'Nucleic 51 8270 2023
source	Homo sapiens
experiment	X-ray (resolution=2.10, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8j0k_A interface=19,53,54, vvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkmylsn > 8j0k_B interface=19,53,54, vvnpnevfcsvpgrlsllSstskykvtvaevqrrlsppeclnasllggvlrrAKsknggrslrekldkiglnlpagrrkaanvtlltslvegeavhlardfgyvcetefpakavaeflnrqhsdpneqvtrknmllatkqickeftdllaqdrsplgnsrpnpilepgiqsclthfnlishgfgspavcaavtalqnyltealkamdkm
interface signature	SAK/SAK

Estimated binding specificities ?

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# IC=4.074 IC/col=0.313 n_of_columns=13

specificity:

A |  24  24   0   7  12  21  24  21  13   6   3  24  24
C |  24  24   0  74  60  21  24  21  13   6  85  24  24
G |  24  24  96   8  12  23  24  33  56  78   3  24  24
T |  24  24   0   7  12  31  24  21  14   6   5  24  24

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updated Mon Dec 18 01:16:41 2023