8j70_AB : 3D-footprint complex

structure name	NATIVE SAND DOMAIN OF PROTEIN SP140 WITH DNA
reference	Liu et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=1.85, R-factor=?)
structural superfamily	SAND domain-like;
reference complex	8j70_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8j70_A interface=56,57,58, tvdfkapllpvtcggvkgilhkkklqqgilvkciqtedgkwftptefeikggharSKNwrlsvrcggwplrwlmengflpdppri > 8j70_B interface=56,57,58,87, tvdfkapllpvtcggvkgilhkkklqqgilvkciqtedgkwftptefeikggharSKNwrlsvrcggwplrwlmengflpdpprirY
interface signature	SKN/SKNY

Estimated binding specificities ?

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# IC=8.769 IC/col=0.877 n_of_columns=10

specificity:

A |   0  12   0   0   0  19  24   7   0   1
C |   0  12   6  96   0  14  24  83   0  89
G |  96  57  89   0  96  51  24   0  96   6
T |   0  15   1   0   0  12  24   6   0   0

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updated Mon Dec 16 05:12:56 2024