8j7s_AB : 3D-footprint complex

structure name	STRUCTURE OF THE SPARTA COMPLEX
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8j7s_A interface=195,235,339,383, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtiskTkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyy > 8j7s_B interface=263,358,362,366,367, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgKNwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni
interface signature	KKTM/RHRKN

Estimated binding specificities ?

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# IC=9.376 IC/col=0.586 n_of_columns=16

specificity:

A |  96   9  24  24  24  24  24  24   0   0  11   9  24   0  96  96
C |   0   9  24  24  24  24  24  24   0  96  67   9  24  96   0   0
G |   0  69  24  24  24  24  24  24  96   0   9  69  24   0   0   0
T |   0   9  24  24  24  24  24  24   0   0   9   9  24   0   0   0

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updated Mon Dec 16 05:13:12 2024