Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF NUCLEOSOME CONTAINING ARABIDOPSIS THALIANA HISTONES
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes8j91_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----RG------       +-----------------------------8ox0_C    
                     !  
  ----RC------       !                              +7on1_c    
                     !                  +-----------1 
  ----RA----RA       !           +------8           +6a5l_g    
                     !           !      ! 
  ------RA----       !           !      +-----------6g0l_D    
                     !  +-------13  
  ----RA------       !  !        !                 +1zla_C    
                     !  !        !   +-------------6 
  ----RG------       !  !        !   !             +8jla_C    
                   -20  !        +--11  
  ----RT------       !  !            !              +7kbd_C    
                     !  !            +--------------2 
  ----RG------       !  !                           +5x0y_G    
                     !  !  
  ----RC------       !  !                                         +7xyf_B    
                     !  !                                      +--5 
  --------KG--       !  !                             +--------7  +7nkx_f    
                     !  !                             !        ! 
  LA--RG------       !  !                           +-9        +---7unc_a    
                     !  !                           ! ! 
  ----RT------       +-19                           ! !            +7zs9_e    
                        !                       +--10 +------------3 
  ----RT------          !                       !   !              +8grq_A    
                        !                       !   !  
  ----RG------          !              +-------12   !             +7ccr_A    
                        !              !        !   +-------------4 
  LC--RT------          !              !        !                 +8hr1_E    
                        !           +-14        !  
  LT--RC------          !           !  !        +-----------------3kwq_E    
                        !        +-15  !  
  IT----------          !        !  !  +--------------------------3wkj_D    
                        !     +-16  !  
  ----RG------          !     !  !  +--------------------------6iy2_A    
                        !  +-17  !  
  --KT--------   L      !  !  !  +--------------------------7cvo_A    
                        +-18  !  
  LT--RC------             !  +---------------------------4xzq_E    
                           !  
  ----RG------             +---------------------------7y7i_E    
                   

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updated Mon Aug 4 01:19:38 2025