8jfr_BD : 3D-footprint complex

structure name	N-TERMINAL DOMAIN OF ACRIIA15 IN COMPLEX WITH PALINDROMIC DNA SUBSTRATE
reference	Deng et al. 'To ? ? ?
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	8jfr_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8jfr_B interface=17,26,27,28,29,31,32,38, smrktierllnselssNsiavrtgvSQAViSKlrngkKelgnltlnsaeklfeyqkemekv > 8jfr_D interface=17,26,27,28,31,32, smrktierllnselssNsiavrtgvSQAviSKlrngkkelgnltlnsaeklfeyqkemekvd
interface signature	NSQAVSKK/NSQASK

Estimated binding specificities ?

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# IC=9.164 IC/col=0.573 n_of_columns=16

specificity:

A |   0  96   8   0  96  24  24  24  24  24  24  24   0  72   0  69
C |   1   0   8   0   0  24  24  24  24  24  24  24  96   8   0   8
G |   8   0  11  96   0  24  24  24  24  24  24  24   0   8   0   8
T |  87   0  69   0   0  24  24  24  24  24  24  24   0   8  96  11

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updated Mon Dec 16 05:34:08 2024