8jfu_AC : 3D-footprint complex

structure name	ACRIIA15 IN COMPLEX WITH PALINDROMIC DNA SUBSTRATE
reference	Deng et al. 'To ? ? ?
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	8jg9_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8jfu_A interface=17,26,27,28,29,31,32,37,38, smrktierllnselssNsiavrtgvSQAViSKlrngKKelgnltlnsaeklfeyqkemekvdtwivyrgrtadmnksyiaegstyeevynnfvdkygydvldediyeiqllkkngenlddydvdsdginnydkldefresdyvdledydyrelfensssqvyyh > 8jfu_C interface=17,26,27,28,29,31,32,38, smrktierllnselssNsiavrtgvSQAViSKlrngkKelgnltlnsaeklfeyqkemekvdtwivyrgrtadmnksyiaegstyeevynnfvdkygydvldediyeiqllkkledydyrelfensssqvyyhefeithe
interface signature	NSQAVSKKK/NSQAVSKK

Estimated binding specificities ?

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# IC=10.053 IC/col=0.628 n_of_columns=16

specificity:

A |   5  96   5   0  90  24  24  24  24  24  24   5   0  79   0  79
C |   5   0   7   0   0  24  24  24  24  24  24   5  96   5   0   7
G |   7   0   5  96   6  24  24  24  24  24  24   5   0   7   0   5
T |  79   0  79   0   0  24  24  24  24  24  24  81   0   5  96   5

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updated Mon Dec 16 05:34:44 2024