8jfu_BD : 3D-footprint complex

structure name	ACRIIA15 IN COMPLEX WITH PALINDROMIC DNA SUBSTRATE
reference	Deng et al. 'To ? ? ?
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	8jg9_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8jfu_B interface=17,26,27,28,29,31,32,37,38, smrktierllnselssNsiavrtgvSQAViSKlrngKKelgnltlnsaeklfeyqkemekvdtwivyrgrtadmnksyiaegstyeevynnfvdkygydvldediyeiqllkkngenlddydvdsdginnydkldefresdyvdledydyrelfensssqvyyhefeithe > 8jfu_D interface=17,26,27,28,29,31,32,38, smrktierllnselssNsiavrtgvSQAViSKlrngkKelgnltlnsaeklfeyqkemekvdtwivyrgrtadmnksyiaegstyeevynnfvdkygydvldediyeiqllkkngenlddydvdsdginnydkldefresdyvdledydyrelfensssqvyyhefeithe
interface signature	NSQAVSKKK/NSQAVSKK

Estimated binding specificities ?

readout + contact

# IC=10.630 IC/col=0.664 n_of_columns=16

specificity:

A |   0  96   9   0  96  24  24  24  24  24  24   0   0  67   0  67
C |   0   0  11   0   0  24  24  24  24  24  24   0  96   9   0  11
G |   0   0   9  96   0  24  24  24  24  24  24   0   0  11   0   9
T |  96   0  67   0   0  24  24  24  24  24  24  96   0   9  96   9

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updated Thu Jan 8 03:53:22 2026