interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE DIOXYGENASE CCTET FROM COPRINOPSIS CINEREA BOUND TO 12BP 5-METHYLCYTOSINE (5MC) CONTAINING DUPLEX DNA
(2OGFeDO JBP1TET oxygenase domain-containing protein)
referenceZhang et al. 'Nucleic 52 3886 2024
sourceCoprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) / Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
experimentX-ray (resolution=2.30, R-factor=0.188)
multimeric complexes7w5p_AH 7w5p_DG
reference complex7w5p_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRPVHE

Estimated binding specificities ?

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# IC=3.142 IC/col=0.628 n_of_columns=5 specificity:   
A |   0   0  13  24  13
C |  96   0  16  24  13
G |   0   0  54  24  13
T |   0  96  13  24  57
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updated Sun Aug 3 01:32:51 2025