Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCOMPLEX OF DDM1-NUCLEOSOME(H2A) COMPLEX WITH DDM1 BOUND TO SHL2
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes8whb_ABCDEFGH
redundant complexes8wh5_C 8wh8_G 8wh9 8wha 8whb
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----HGRTRG----             +-----------------------------8rbx_V    
                             !  
  --------RA--RA             !                              +6a5l_g    
                             !               +--------------1 
  --------RG----             !  +------------6              +8upf_G    
                          +-12  !            ! 
  --------RC----          !  !  !            +--------------7yqk_C    
                          !  !  !  
  --------RT----          !  !  !       +-------------------7kbd_C    
                          !  !  !     +-8 
  --------RT----          !  !  !     ! !                  +7zs9_e    
                          !  +-11     ! +------------------3 
  --------RC----          !     !   +-9                    +7ux9_E    
                          !     !   ! ! 
  ----------KG--          !     !   ! !                  +--7nkx_f    
                       +-13     !   ! +------------------5 
  LA------RG----       !  !     !   !                    !  +7unc_a    
                       !  !     +--10                    +--2 
  --------RT----       !  !         !                       +6px1_A    
                       !  !         !  
  ----KT--------   L   !  !         !                     +-7cvo_A    
                     -14  !         !    +----------------4 
  --------RA----       !  !         +----7                +-7e9c_F    
                       !  !              ! 
  --IT----------       !  !              +------------------3wkj_D    
                       !  !  
  --------RG----       !  +-----------------------------7ccr_A    
                       !  
  --------RG----       +-----------------------------7y7i_E    
                     

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updated Sun Jan 11 00:41:23 2026