8oz6_AB : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8oz6_A interface=263,289,358,362, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8oz6_B interface=209,211,214,217,253,294,401, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpiRdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RNHR/RFIHKYM

Estimated binding specificities ?

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# IC=7.099 IC/col=0.507 n_of_columns=14

specificity:

A |  96  24  24  24  54  24  24  24  54  96  96  24  96  96
C |   0  24  24  24  13  24  24  24  16   0   0  24   0   0
G |   0  24  24  24  13  24  24  24  13   0   0  24   0   0
T |   0  24  24  24  16  24  24  24  13   0   0  24   0   0

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updated Mon Dec 16 07:42:55 2024