8oz6_AB : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8oz6_A interface=263,289,358,362, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8oz6_B interface=209,211,214,217,253,294,401, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpiRdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqYhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RNHR/RFIHKYM

Estimated binding specificities ?

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# IC=5.277 IC/col=0.330 n_of_columns=16

specificity:

A |  24  24  60  24  24  31  45  31  24  24  38  81  96  31  96  96
C |  24  24  12  24  24  21  16  23  24  24  19   7   0  21   0   0
G |  24  24  12  24  24  21  19  21  24  24  19   4   0  21   0   0
T |  24  24  12  24  24  23  16  21  24  24  20   4   0  23   0   0

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updated Mon Dec 18 02:32:58 2023