8oz6_CD : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX LIGAND-FREE
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8oz6_C interface=263,289,358,362, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8oz6_D interface=211,214,217, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RNHR/FIH

Estimated binding specificities ?

contact

# IC=4.164 IC/col=0.260 n_of_columns=16

specificity:

A |  24  24  24  96  52  31  24  24  24  24  24  88  60  24  24  96
C |  24  24  24   0  14  21  24  24  24  24  24   4  12  24  24   0
G |  24  24  24   0  14  23  24  24  24  24  24   2  12  24  24   0
T |  24  24  24   0  16  21  24  24  24  24  24   2  12  24  24   0

scan!

home
updated Mon Dec 18 02:33:09 2023