8oze_EF : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX DIMER HIGH RESOLUTION
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8oze_E interface=96,191,195, eeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8oze_F interface=72,211,214,217,253, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/RFIHK

Estimated binding specificities ?

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# IC=3.126 IC/col=0.223 n_of_columns=14

specificity:

A |  12  38  24  24  24  21  24  24  24  88   9  24  24   0
C |  60  19  24  24  24  21  24  24  24   4  67  24  24  96
G |  12  19  24  24  24  23  24  24  24   2   9  24  24   0
T |  12  20  24  24  24  31  24  24  24   2  11  24  24   0

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updated Thu Sep 12 05:38:07 2024