8ozf_CE : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-2
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ozf_C interface=263,289,358, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrrrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8ozf_E interface=211,214,217,401, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RNH/FIHM

Estimated binding specificities ?

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# IC=4.434 IC/col=0.317 n_of_columns=14

specificity:

A |  96  24  24  24  24  24  24  24  24  96  24  54  54  96
C |   0  24  24  24  24  24  24  24  24   0  24  16  16   0
G |   0  24  24  24  24  24  24  24  24   0  24  13  13   0
T |   0  24  24  24  24  24  24  24  24   0  24  13  13   0

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updated Thu Sep 12 05:38:27 2024