8ozf_HM : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-2
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ozf_H interface=263,289,358,362, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsNktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8ozf_M interface=211,214,217,401,437, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacIfadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RNHR/FIHMI

Estimated binding specificities ?

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# IC=7.859 IC/col=0.561 n_of_columns=14

specificity:

A |  96  96  24  31  24  24  24  24  74  96  96  74  31  96
C |   0   0  24  21  24  24  24  24   7   0   0   8  21   0
G |   0   0  24  21  24  24  24  24   8   0   0   7  21   0
T |   0   0  24  23  24  24  24  24   7   0   0   7  23   0

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updated Thu Sep 12 05:38:50 2024