8ozg_AB : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-1
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ozg_A interface=263,358,362, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8ozg_B interface=211,214,217,401, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/FIHM

Estimated binding specificities ?

contact

# IC=5.119 IC/col=0.320 n_of_columns=16

specificity:

A |  24  24  96  96  24  24  24  24  24  24  24  67  52  52  60  96
C |  24  24   0   0  24  24  24  24  24  24  24   9  14  16  12   0
G |  24  24   0   0  24  24  24  24  24  24  24   9  16  14  12   0
T |  24  24   0   0  24  24  24  24  24  24  24  11  14  14  12   0

scan!

home
updated Mon Dec 18 02:35:04 2023