8ozg_CE : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF SPARTA COMPLEX TETRAMER POST-NAD CLEAVAGE-1
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ozg_C interface=263,358,362, mrnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsyni > 8ozg_E interface=211,214,217,218,253,401, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpkemvqttynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdFskIegHLawtistaafykaggkpwklsdvrngvcylglvykKveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/FIHLKM

Estimated binding specificities ?

contact

# IC=5.807 IC/col=0.415 n_of_columns=14

specificity:

A |  96  24  24  24  24  24  24  24  24  96  57  54  96  96
C |   0  24  24  24  24  24  24  24  24   0  13  13   0   0
G |   0  24  24  24  24  24  24  24  24   0  13  16   0   0
T |   0  24  24  24  24  24  24  24  24   0  13  13   0   0

scan!

home
updated Mon Dec 16 07:45:54 2024