8pk1_ABD : 3D-footprint complex

structure name	CAS1-CAS2 CRISPR INTEGRASE BOUND TO PRESPACER DNA, STREPTOCOCCUS THERMOPHILUS DGCC 7710 CRISPR3 SYSTEM
experiment	NMR
reference complex	8pk1_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8pk1_A interface=12,21,22, ymrmilmfdmpTdtaeerkaYRkfrkfllsegfimhqfsvysklllnhtantamvgrlkannpkkgnitiltvtekqfarmiylygdkntsianseerlvflgdnyc > 8pk1_B interface= gwrtvvvnihsKlsyknnhlIFrnsyktemihlseidilllettdivlttmlvkrlvdenilvifcddkrlptafltpyyarhdsslqiarqiawkenvkcevwtaiiaqkilnqsyylgecsffeksqsimelyhglerfdpsnreghsariyfntlfgndftresdndinaaldygytlllsmfarevvvcgcmtqiglkfnqfnlasdimepfrpiidrivyqnrhnnfvkikkelfsifsetylyngkemylsnivsdytkkvikalnqlgeeipefr > 8pk1_D interface=12,21,22,25, ymrmilmfdmpTdtaeerkaYRkfRkfllsegfimhqfsvysklllnhtantamvgrlkannpkkgnitiltvtekqfarmiylygdkntsianseerlvflgdnyc
interface signature	TYR/KIF/TYRR

Estimated binding specificities ?

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# IC=7.212 IC/col=0.601 n_of_columns=12

specificity:

A |   0  24  24   6  24   3   0  18   0   3  24   5
C |   0  24  24   3  24   7   0  11  96  16  24   3
G |   0  24  24   3  24  81   0  14   0  18  24  88
T |  96  24  24  84  24   5  96  53   0  59  24   0

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updated Sat Jun 27 16:53:54 2026