8pop_ABCDEF : 3D-footprint complex

structure name	HK97 SMALL TERMINASE IN COMPLEX WITH DNA
reference	Jenkins et al. Biorxiv ? ? 2023
source	Escherichia phage HK97
experiment	X-ray (resolution=3.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8pop_A interface=2,5, dKriRsdssaaavqamknaavdtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn > 8pop_B interface=103,105,106, dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatngEsRDqkkrnqndrdarntkn > 8pop_C interface= dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn > 8pop_D interface= dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn > 8pop_E interface= dtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn > 8pop_F interface= vdtidppshaglekkaepfwhdnirskaldswtpadllaavelannqlyitvlrkdlrkeerirgeerdeglikdlrkqivelqrtilaqrrdlqihshatn
interface signature	KR/ERD////

Estimated binding specificities ?

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# IC=2.708 IC/col=0.097 n_of_columns=28

specificity:

A |  24  24  24  24  24   9  13  66  42  21  21   8   5  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24
C |  24  24  24  24  24  67  10  10  18  33  31  70   3  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24
G |  24  24  24  24  24   9  10  10  18  21  23  10  85  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24
T |  24  24  24  24  24  11  63  10  18  21  21   8   3  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24

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updated Mon Dec 18 02:49:33 2023