8rkt_AC : 3D-footprint complex

structure name	CONFORMATIONAL LANDSCAPE OF THE TYPE V-K CRISPR-ASSOCIATED TRANSPOSONINTEGRATION ASSEMBLY CAST V-K CAS12K DOMAIN LOCAL- REFINEMENT MAP
experiment	NMR
structural superfamily	S15/NS1 RNA-binding domain;
reference complex	7n3p_A 8rkt_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8rkt_A interface=3,53,77,78,93,97,99,103,110,147,148,151,174,238,241,258,259,278,323,325,348,373,385,388,389,469,473,480,519,525,526,533,534,537,544,545,548,553,579,582, ssQitiqarlisfesnrqqlwklmadlntplinellcqlgqhpdfekwqqkgKlpstvvsqlcqplktdprfagqpSRlymsaihivdyiykSwlaIqKrlqQqldgktRwlemlnsdaelvelsgdtleairvkaaeilaiamslSKtlFdayqetediksrsaisyllkngCkltdkeedsekfakrrrqveiqiqrlteklisrmpkgrdltnakwletlltatttvaednaqaKrwQdilltrssslpfplvfETnedmvwsknqkgrlcvhfNglsdlifevycgnrqlhwfqrfledqqtkrksknqhssglftlrNgHlvwlegegkgepwnlhhltlycCvdnrlwteegteivrqekadeitkFitnmksdtqqaLiqRKqstltrinnsferpsqplyqgqshilvgvslglekpatvavvdaiankvlayrsikqllgdnyellnrqrrqqqylsheRhkaQknfspnQfgaselgqhidrllakaivalartykagsivlpklgdmRevvqsEIqaiaeqKFpgYiegqqkYAkqYrvnvHrwsygrliqsiqskaaqtgivieegKqpIrgsphdkakelalsaynlrl > 8rkt_C interface=36,46,50,55,57, eapdvkpwlflikpyegeslshflgrfrranhlsaSglgtlagigAivaRwerfHfNprpsqqeleaiasvvevdaqrlaqmlppagvgmqhepirlcgacyaespchriewqyksvwkcdrhqlkilakcpncqapfkmpalwedgcchrcrmpfaemaklqk
interface signature	QKSRSIKQRSKFCKQETNNHCFLRKRQQREIKFYYAYHKI/SARHN

Estimated binding specificities ?

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# IC=24.739 IC/col=1.076 n_of_columns=23

specificity:

A |   0   0   6  24   0   0  96  54  96   0   0  96   0  16   0  24   0   0  89  96   0   0   0
C |  96   0   6  24   0   0   0  16   0   0   0   0  96  13   0  24   0  96   7   0  96  96   0
G |   0   0   6  24   0   0   0  13   0   0  96   0   0   6   0  24   0   0   0   0   0   0   7
T |   0  96  78  24  96  96   0  13   0  96   0   0   0  61  96  24  96   0   0   0   0   0  89

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updated Thu Jan 8 08:32:10 2026