8s4t_ABC : 3D-footprint complex

structure name	DNA BOUND STRUCTURE OF PRGE FROM PLASMID PCF10
reference	Berntsson et al. 'Life 7 ? 2024
experiment	X-ray (resolution=2.67, R-factor=?)
reference complex	8s4t_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8s4t_A interface=9,62,66,108,110,113,120, skyerplkResqikefelgthaaviekvqkkrsqkgndmfllsllgksnekgvyfltfgndYtedNlryilasiqdngveipdvdfgynretfeflkgkdvyiqveeQeYkgKvkhavtNfltqdefeeseemefs > 8s4t_B interface=55,60,62,66,108,110,120, skyerplkresqikefelgthaaviekvqkkrsqkgndmfllsllgksnekgvyFltfgNdYtedNlryilasiqdngveipdvdfgynretfeflkgkdvyiqveeQeYkgkvkhavtNfltqdefeeseemefs > 8s4t_C interface=62,66,108,110,120, skyerplkresqikefelgthaaviekvqkkrsqkgndmfllsllgksnekgvyfltfgndYtedNlryilasiqdngveipdvdfgynretfeflkgkdvyiqveeQeYkgkvkhavtNfltqdefeeseemefs
interface signature	RYNQYKN/FNYNQYN/YNQYN

Estimated binding specificities ?

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# IC=15.176 IC/col=1.012 n_of_columns=15

specificity:

A |  96  96  24  96  96  96  96  57  96  96  96  57  24  96  96
C |   0   0  24   0   0   0   0  13   0   0   0  13  24   0   0
G |   0   0  24   0   0   0   0  13   0   0   0  13  24   0   0
T |   0   0  24   0   0   0   0  13   0   0   0  13  24   0   0

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updated Mon Dec 16 09:38:34 2024