8sp0_AB : 3D-footprint complex

structure name	SYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sp0_A interface=262,357,361,365, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgKnwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8sp0_B interface=209,397, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHRK/KM

Estimated binding specificities ?

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# IC=2.050 IC/col=0.102 n_of_columns=20

specificity:

A |  24  24  24  24  24  74  21  24  24  24  24  24  24  14  16  21  16  24   2  33
C |  24  24  24  24  24   7  21  24  24  24  24  24  24  16  45  33  16  24  88  21
G |  24  24  24  24  24   7  33  24  24  24  24  24  24  52  16  21  45  24   4  21
T |  24  24  24  24  24   8  21  24  24  24  24  24  24  14  19  21  19  24   2  21

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updated Mon Dec 18 03:00:57 2023