8sp0_AB : 3D-footprint complex

structure name	SYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;Ribonuclease H-like;
reference complex	8ffi_E 8ffi_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sp0_A interface=262,357,361,365, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgKnwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8sp0_B interface=209,397, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitrpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfsKieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsMevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHRK/KM

Estimated binding specificities ?

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# IC=6.130 IC/col=0.438 n_of_columns=14

specificity:

A |  96  13  24  24  24  24  24  24   0   9  13   6  24   0
C |   0  15  24  24  24  24  24  24   0  75  61   6  24  96
G |   0  68  24  24  24  24  24  24  96   6   6  75  24   0
T |   0   0  24  24  24  24  24  24   0   6  16   9  24   0

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updated Mon Dec 16 10:56:18 2024