8sp0_EF : 3D-footprint complex

structure name	SYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sp0_E interface=262,357,361, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe > 8sp0_F interface=72, mkeliyieepkilfahgqkctdardglalfgplnnlygiksgvigtkqglkifrdyldhiqkpiynsnsitRpmfpgfeavfdckwestgitfkevtnedigkflynssthkrtydlvslfidkiisanknedenvdvwfvivpdeiykycrpnsvlpaetynydaqfhdqfkarllkhtiptqifrestlawrdfknafglpirdfskieghlawtistaafykaggkpwklsdvrngvcylglvykkveksknprnaccaaqmfldngdgtvfkgevgpwynpkngqyhlepkeakallsqslqsykeqigeypkevfihaktrfnhqewdaflevtpketnlvgvtisktkplklyktegdytilrgnayvvnersaflwtvgyvpkiqtalsmevpnplfieinkgeadikqvlkdilsltklnynacifadgepvtlrfadkigeiltastdiktpplafkyyi
interface signature	RHR/R

Estimated binding specificities ?

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# IC=1.609 IC/col=0.080 n_of_columns=20

specificity:

A |  24  24  24  24  24  96  21  24  24  24  24  24  24  16  19  19  24  21  24  24
C |  24  24  24  24  24   0  21  24  24  24  24  24  24  16  39  38  24  23  24  24
G |  24  24  24  24  24   0  31  24  24  24  24  24  24  48  19  19  24  21  24  24
T |  24  24  24  24  24   0  23  24  24  24  24  24  24  16  19  20  24  31  24  24

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updated Mon Dec 18 03:00:45 2023